Fully phased consensus sequences
were generated for each allele and exported from Twin[TM] in FASTA format.
Since the lexA box consensus sequence
is only 16 bp, in order to clone it upstream the [bla.
Detailed features of these proteins are described hereafter, based on their consensus sequence
obtained from the Boxshade program is shown.
Herein, recombinant plasmids coding consensus sequences
for M protein from genotypes A, D and F were constructed.
The 169 bp consensus sequence
for the hamster B2 element (Kass et al.
The deletion generated a truncated polypeptide lacking the GGEK consensus sequence
and the heme-binding domain resulting in a nonfunctional protein.
The consensus sequence
constructed from these fragments had 98% or greater nucleotide sequence identity with SSU rRNA gene sequences of strains of Neoparamoeba pemaquidensis and associated with high confidence in distance- and parsimony-based phylogenetic analyses with strains of Neoparamoeba pemaquidensis and not members of the family Paramoebidae, e.
Effect of transition metals on binding of p53 protein to supercoiled DNA and to consensus sequence
in BNA fragments.
A consensus sequence
obtained from the sample will be compared to the Revised Cambridge Reference Sequence (rCRS) described by Andrews and co-workers ([Andrews et al.
You line up the [amino acid] sequences and ask if there's a consensus sequence
At the outset of the pruning process, the consensus sequence
is determined (missing or undetermined bases are ignored).
We assembled and analyzed the consensus sequence
of each segment by using SeqMan Pro from the Lasergene Suite 12 (DNASTAR Inc.
Comparing with consensus sequence
the seven neutralizing epitopes (D72, E74, A75, K78, A79, L343, 151ILRLKESIAATNEAVHEVTDG171), observed as critical for structure and function of F protein, and were conserved in chicken/NDV/Pak/AW-14 strain.